Ligand · NGM
NGM · Nogalamycin
NGM, Nogalamycin (C39 H49 N O16, 787.8 g/mol), in the MolNFT structures on GenesisL1: bound in 16 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- NGM
- Formula
- C39 H49 N O16
- Class
- ligand
- Structures
- 16
- PDB entries
- 8
Binding sites
NGM in 16 structures; the first of them:
- 182D · DNA-nogalamycin interactions: the crystal structure of D(TGATCA) complexed with… · NGM A14 · binds DT1, DG2, DA3, DT4, DT10, DC11, DA12
- 1D17 · DNA-nogalamycin interactions · NGM A7 · binds 5CM1, DG2, DT3, DA4
- 1D21 · Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural… · NGM A14 · binds 5CM1, DG2, DT3, AS4, AS10, 5CM11, DG12
- 1QCH · Structure, dynamics and hydration of the nogalamycin-D(ATGCAT)2 complex determined by NMR… · NGM A13 · binds DT2, DG3, DC4, DA5, DG9, DC10, DA11
- 224D · DNA-drug refinement: a comparison of the programs nuclsq, prolsq, SHELXL93 and X-plor… · NGM A14 · binds DT1, DG2, DA3, DT4, DT10, DC11, DA12
- 245D · DNA-drug refinement: a comparison of the programs nuclsq, prolsq, SHELXL93 and X-plor… · NGM A14 · binds DT1, DG2, DA3, DT4, DT10, DC11, DA12
- 258D · Factors affecting sequence selectivity on nogalamycin intercalation: the crystal… · NGM A26 · binds DT1, DG2, DT3, DA4, DA10, DC11, DA12
- 282D · A continous transition from a-DNA to B-DNA in the 1:1 complex between nogalamycin and the… · NGM A13 · binds DC3, DG4, DG5, DG6, DC8, DC9, DG10
- 182D · DNA-nogalamycin interactions: the crystal structure of D(TGATCA) complexed with… · NGM A14 · binds DT1, DG2, DA3, DT4, DT10, DC11, DA12
- 1D17 · DNA-nogalamycin interactions · NGM A7 · binds 5CM1, DG2, DT3, DA4
- 1D21 · Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural… · NGM A14 · binds 5CM1, DG2, DT3, AS4, AS10, 5CM11, DG12
- 1QCH · Structure, dynamics and hydration of the nogalamycin-D(ATGCAT)2 complex determined by NMR… · NGM A13 · binds DT2, DG3, DC4, DA5, DG9, DC10, DA11
- 224D · DNA-drug refinement: a comparison of the programs nuclsq, prolsq, SHELXL93 and X-plor… · NGM A14 · binds DT1, DG2, DA3, DT4, DT10, DC11, DA12
- 245D · DNA-drug refinement: a comparison of the programs nuclsq, prolsq, SHELXL93 and X-plor… · NGM A14 · binds DT1, DG2, DA3, DT4, DT10, DC11, DA12
- 258D · Factors affecting sequence selectivity on nogalamycin intercalation: the crystal… · NGM A26 · binds DT1, DG2, DT3, DA4, DA10, DC11, DA12
- 282D · A continous transition from a-DNA to B-DNA in the 1:1 complex between nogalamycin and the… · NGM A13 · binds DC3, DG4, DG5, DG6, DC8, DC9, DG10
Residues it binds most
DT 28, DA 24, DG 30, DC 24, 5CM 6, AS 4 (residue and the binding sites it lines).
Found with
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