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Ligand · NB9

NB9 · Lamifiban

NB9, Lamifiban (C24 H28 N4 O6, 468.5 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
NB9
Formula
C24 H28 N4 O6
Class
ligand
Structures
3
PDB entries
2

Binding sites

NB9 in 3 structures; the first of them:

  • 7UK9 · Integrin alpha IIB beta3 complex with lamifiban (Mn) · NB9 B2005 · binds PHE160, TYR189, TYR190, LEU192, ASP224, SER225, SER226, PHE231 and 10 more
  • 7UJK · Integrin ALAPHIIBBETA3 complex with lamifiban · NB9 B2005 · binds PHE160, TYR189, TYR190, LEU192, ASP224, SER225, PHE231, SER121 and 7 more
  • 7UK9 · Integrin ALAPHIIBBETA3 complex with lamifiban (mn) · NB9 B2005 · binds PHE160, TYR189, TYR190, LEU192, ASP224, SER225, PHE231, SER121 and 8 more

Residues it binds most

TYR 6, SER 6, ARG 6, PHE 6, ASP 6, ALA 6, ASN 6, GLU 6, LEU 6 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • MN · Manganese (II) ion
  • MG · Magnesium ion
  • GOL · Glycerol

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