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Ligand · N6P

N6P · 6-(naphthalen-2-yl)-9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purine

N6P, 6-(naphthalen-2-yl)-9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purine (C20 H19 N4 O7 P, 458.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the…

Component
N6P
Formula
C20 H19 N4 O7 P
Class
ligand
Structures
4
PDB entries
2

Binding sites

N6P in 4 structures; the first of them:

  • 4P5D · Crystal structure of rat DNPH1 (rcl) with 6-naphthyl-purine-riboside-monophosphate · N6P C201 · binds TYR13, PHE14, CYS15, GLY16, SER17, ILE18, ARG19, GLY20 and 12 more
  • 4P5E · Crystal structure of human DNPH1 (rcl) with 6-naphthyl-purine-riboside-monophosphate · N6P A201 · binds TYR24, PHE25, CYS26, GLY27, SER28, ILE29, ARG30, GLY31 and 12 more
  • 4P5D · Crystal structure of rat DNPH1 (rcl) with 6-naphthyl-purine-riboside- monophosphate · N6P C201 · binds TYR13, PHE14, CYS15, GLY16, SER17, ILE18, ARG19, GLY20 and 12 more
  • 4P5E · Crystal structure of human DNPH1 (rcl) with 6-naphthyl-purine- riboside-monophosphate · N6P A201 · binds TYR24, PHE25, CYS26, GLY27, SER28, ILE29, ARG30, GLY31 and 12 more

Residues it binds most

GLY 8, GLU 8, ILE 8, SER 8, VAL 8, LEU 8, ARG 8, CYS 8, PHE 8, TYR 8 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • SO4 · Sulfate ion

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