GL1X · GenesisL1 explorer

Ligand · MV8

MV8 · (4-{[(5R)-3-(4-carbamimidoylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}piperazin-1-yl)acetic acid

MV8, (4-{[(5R)-3-(4-carbamimidoylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}piperazin-1-yl)acetic acid (C17 H23 N5 O4, 361.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
MV8
Formula
C17 H23 N5 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

MV8 in 2 structures; the first of them:

  • 7UCY · Integrin alpha IIB beta3 complex with gantofiban · MV8 B2005 · binds ASP159, PHE160, TYR189, TYR190, LEU192, ASP224, SER225, SER226 and 11 more
  • 7UCY · Integrin ALAPHIIBBETA3 complex with gantofiban · MV8 B2005 · binds PHE160, TYR189, TYR190, LEU192, ASP224, SER225, PHE231, SER121 and 6 more

Residues it binds most

SER 4, TYR 4, ASP 4, ARG 4, PHE 4, ALA 4, ASN 4, GLU 4, LEU 4 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • MN · Manganese (II) ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CL · Chloride ion
  • SO4 · Sulfate ion

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