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Ligand · MF4

MF4 · Tetrafluoromagnesate(2-)

MF4, Tetrafluoromagnesate(2-) (F4 Mg -2, 100.3 g/mol), in the MolNFT structures on GenesisL1: bound in 20 records (15 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
MF4
Formula
F4 Mg -2
Class
ligand
Structures
20
PDB entries
15

Binding sites

MF4 in 20 structures; the first of them:

  • 5AVS · Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+… · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AVT · Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+… · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AVY · Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+… · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AVZ · Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+… · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AW0 · Kinetics by X-ray crystallography: Tl+-substitution of bound K+ in the E2.MgF42-.2K+… · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AW6 · Kinetics by X-ray crystallography: Rb+-substitution of bound K+ in the E2.MgF42-.2K+… · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AW8 · Kinetics by X-ray crystallography: E2.MgF42-.2RB+ crystal · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 5AW9 · Kinetics by X-ray crystallography: native E2.MgF42-.2K+ crystal for Rb+ bound crystals · MF4 A2001 · binds THR219, GLY220, GLU221, ASP376, LYS377, THR378, VAL616, THR617 and 6 more
  • 6JXH · K+-bound E2-MgF state of the gastric proton pump (Tyr799Trp) · MF4 A1101 · binds THR228, GLY229, GLU230, ASP385, LYS386, THR387, THR626, GLY627 and 4 more
  • 6JXI · Rb+-bound E2-MgF state of the gastric proton pump (Tyr799Trp) · MF4 A1101 · binds THR228, GLY229, GLU230, ASP385, LYS386, THR387, THR626, GLY627 and 4 more
  • 6JXK · Rb+-bound E2-MgF state of the gastric proton pump (Wild-type) · MF4 A1101 · binds THR228, GLY229, GLU230, ASP385, LYS386, THR387, THR626, GLY627 and 4 more
  • 7BGY · Cryo-EM Structure of KdpFABC in E2Pi state with MgF4 · MF4 B702 · binds THR159, GLY160, GLU161, ASP307, LYS308, THR309, ILE470, THR471 and 5 more
  • 7OYH · Crystal structure of depupylase Dop in complex with Pup and ADP/tetrafluoromagnesate · MF4 A627 · binds HIS155, THR217, ARG227, GLU229, ARG239, HIS241, GLU71
  • 6JXH · K+-bound E2-mgf state of the gastric proton pump (TYR799TRP) · MF4 A1101 · binds THR228, GLY229, GLU230, ASP385, LYS386, THR387, THR626, GLY627 and 4 more
  • 6JXI · Rb+-bound E2-mgf state of the gastric proton pump (TYR799TRP) · MF4 A1101 · binds THR228, GLY229, GLU230, ASP385, LYS386, THR387, THR626, GLY627 and 4 more
  • 6JXK · Rb+-bound E2-mgf state of the gastric proton pump (wild-type) · MF4 A1101 · binds THR228, GLY229, GLU230, ASP385, LYS386, THR387, THR626, GLY627 and 4 more
  • 6S3I · Crystal structure of helicase PIF1 from thermus oshimai in complex with ssdna (DT)18 and… · MF4 A1003 · binds ALA93, GLY94, LYS97, THR98, GLU172, GLN212, ARG256, GLN435 and 2 more
  • 7BGY · Cryo-EM structure of kdpfabc in E2PI state with MGF4 · MF4 B702 · binds THR159, GLY160, GLU161, ASP307, LYS308, THR309, THR471, GLY472 and 2 more
  • 7M5Y · Human ATP13A2 in the outward-facing E2 state bound to spermine and magnesium fluoride · MF4 A1202 · binds THR346, GLY347, GLU348, ASP513, LYS514, THR515, THR750, GLY751 and 2 more
  • 7OYH · Crystal structure of depupylase dop in complex with pup and ADP/TETRAFLUOROMAGNESATE · MF4 A627 · binds THR217, ARG227, GLU229, ARG239, HIS241, GLU71

Residues it binds most

THR 22, ASP 19, GLY 20, LYS 20, GLU 22, ASN 19, VAL 8, ARG 3, HIS 2, GLN 1 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CLR · Cholesterol
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • K · Potassium ion
  • TL · Thallium (I) ion
  • CE1 · O-dodecanyl octaethylene glycol
  • PCW · 1,2-dioleoyl-sn-glycero-3-phosphocholine
  • RB · Rubidium ion
  • ADP · Adenosine-5'-diphosphate
  • 9Y0 · (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate
  • PEV · (1S)-2-{[(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate
  • SO4 · Sulfate ion

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