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Ligand · ME6

ME6 · [(2R,3S,5R)-5-(4-azanyl-3-methyl-2-oxo-pyrimidin-3-ium-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

ME6, [(2R,3S,5R)-5-(4-azanyl-3-methyl-2-oxo-pyrimidin-3-ium-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate (C10 H17 N3 O7 P +1, 322.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding…

Component
ME6
Formula
C10 H17 N3 O7 P +1
Class
ligand
Structures
1
PDB entries
1

Binding sites

ME6 in 1 structure; the first of them:

  • 8JNR · Crystal structure of human ALKBH3 bound to 3mC containing ssDNA through distal crosslink · ME6 D1003 · binds ARG122, TYR127, ARG131, TYR141, TYR143, SER144, LEU177, VAL188 and 7 more

Residues it binds most

ARG 1, TYR 1, SER 1, ASP 1, CYS 1, GLU 1, HIS 1, LEU 1, TRP 1, VAL 1 (residue and the binding sites it lines).

Found with

  • OGA · N-oxalylglycine
  • MN · Manganese (II) ion

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