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Ligand · MB5

MB5 · (5as,12as,13as)-9-chloro-12,12-dimethyl-2,3,11,12,12A, 13-hexahydro-1H,5H,6H-5A,13A-(epiminomethano) indolizino[7,6-b]carbazol-14-one

MB5, (5as,12as,13as)-9-chloro-12,12-dimethyl-2,3,11,12,12A, 13-hexahydro-1H,5H,6H-5A,13A-(epiminomethano) indolizino[7,6-b]carbazol-14-one (C21 H24 Cl N3 O, 369.9 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB…

Component
MB5
Formula
C21 H24 Cl N3 O
Class
ligand
Structures
7
PDB entries
4

Binding sites

MB5 in 7 structures; the first of them:

  • 5WGW · Crystal Structure of Wild-type MalA', malbrancheamide B complex · MB5 A714 · binds PRO85, SER129, VAL130, GLY131, ALA132, PRO133, VAL136, LEU137 and 10 more
  • 5WGX · Crystal Structure of MalA' H253A, malbrancheamide B complex · MB5 A718 · binds PRO85, SER129, VAL130, GLY131, ALA132, PRO133, VAL136, LEU137 and 10 more
  • 6PVF · Crystal structure of PhqK in complex with malbrancheamide B · MB5 A502 · binds GLN52, ILE81, LEU96, VAL99, CYS100, ASN104, PHE219, VAL221 and 11 more
  • 5WGW · Crystal structure of wild-type mala', malbrancheamide B complex · MB5 A714 · binds PRO85, SER129, VAL130, GLY131, ALA132, PRO133, VAL136, LEU137 and 10 more
  • 5WGX · Crystal structure of mala' H253A, malbrancheamide B complex · MB5 A718 · binds PRO85, VAL130, GLY131, ALA132, PRO133, VAL136, LEU137, PHE489 and 7 more
  • 5WGY · Crystal structure of mala' C112S/C128S, malbrancheamide B complex · MB5 A714 · binds PRO85, SER129, VAL130, GLY131, ALA132, PRO133, VAL136, LEU137 and 7 more
  • 6PVF · Crystal structure of phqk in complex with malbrancheamide B · MB5 A502 · binds GLN52, ILE81, LEU96, VAL99, PHE219, VAL221, PHE243, ILE245 and 7 more

Residues it binds most

ILE 12, LEU 7, PRO 12, TRP 10, VAL 7, ALA 7, GLU 10, PHE 7, GLY 7, HIS 5 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • CD · Cadmium ion
  • ZN · Zinc ion
  • CL · Chloride ion
  • SO4 · Sulfate ion

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