Ligand · M12

M12 · 10-methylundecanoic acid

M12, 10-methylundecanoic acid (C12 H24 O2, 200.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: M12
Formula: C12 H24 O2
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

M12 in 2 structures; the first of them:

6M5E · Human serum albumin with cyclic peptide dalbavancin · M12 F102 · binds VAL46, PHE49, ASN61, LEU66, LEU69, PHE70, D4P4, OMZ6
6M5E · Human serum albumin with cyclic peptide dalbavancin · M12 F102 · binds VAL46, PHE49, ASN61, LEU66, LEU69, PHE70, D4P4, OMZ6

Residues it binds most

PHE 8, LEU 8, D4P 10, VAL 8, ASN 6, OMZ 6, TYR 4, HIS 2, LYS 2, SER 2 (residue and the binding sites it lines).

Found with

F8F · (2S,5S)-5-azanyl-3,4,6-tris(oxidanyl)oxane-2-carboxylic acid
F8X · 2-amino-2-deoxy-beta-D-altropyranuronic acid
JEF · O-(O-(2-aminopropyl)-O'-(2-methoxyethyl)polypropylene glycol 500)
WOO · beta-L-allopyranose
MAN · alpha-D-mannopyranose
DIB · 3-amino-(dimethylpropylamine)

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