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Ligand · LTP

LTP · 4-amino-1-{2-deoxy-5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-beta-L-erythro-pentofuranosyl}pyrimidin-2(1H)-one

LTP, 4-amino-1-{2-deoxy-5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-beta-L-erythro-pentofuranosyl}pyrimidin-2(1H)-one (C9 H15 N3 O10 P2, 387.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
LTP
Formula
C9 H15 N3 O10 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

LTP in 2 structures; the first of them:

  • 4QWC · Ternary Crystal Structures of a Y-family DNA polymerase DPO4 from Sulfobus Solfataricus… · LTP A405 · binds ASP7, PHE8, ASP9, TYR10, PHE11, TYR12, ALA44, THR45 and 9 more
  • 4QWC · Ternary crystal structures of a Y-family DNA polymerase DPO4 from sulfobus solfataricus… · LTP A405 · binds ASP7, PHE8, ASP9, TYR10, PHE11, TYR12, ALA44, THR45 and 9 more

Residues it binds most

ASP 4, TYR 4, ALA 4, DG 4, PHE 4, ARG 4, DOC 4, ILE 4, LYS 4, THR 4 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ACT · Acetate ion

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