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Ligand · LBW

LBW · 3-[2-[(Z)-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E,4R)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

LBW, 3-[2-[(Z)-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E,4R)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methy…

Component
LBW
Formula
C33 H37 N4 O6 +1
Class
ligand
Structures
8
PDB entries
4

Binding sites

LBW in 8 structures; the first of them:

  • 3S7Q · Crystal Structure of a Monomeric Infrared Fluorescent Deinococcus radiodurans… · LBW A331 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, PHE198 and 23 more
  • 4O8G · Structure of Infrared Fluorescent Protein 1.4 · LBW A402 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, MET186 and 24 more
  • 4Z1W · CRYSTAL STRUCTURE OF MONOMERIC BACTERIOPHYTOCHROME mutant D207L Y263F From Synchrotron · LBW A402 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, PHE198 and 23 more
  • 4ZRR · Crystal Structure of Monomeric Bacteriophytochrome mutant D207L Y263F at 1.5 A resolution… · LBW A402 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, PHE198 and 23 more
  • 3S7Q · Crystal structure of a monomeric infrared fluorescent deinococcus radiodurans… · LBW A331 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, PHE198 and 23 more
  • 4O8G · Structure of infrared fluorescent protein 1.4 · LBW A402 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, MET186 and 24 more
  • 4Z1W · Crystal structure of monomeric bacteriophytochrome mutant D207L Y263F from synchrotron · LBW A402 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, PHE198 and 23 more
  • 4ZRR · Crystal structure of monomeric bacteriophytochrome mutant D207L Y263F at 1.5 a resolution… · LBW A402 · binds THR20, THR21, CYS24, GLU27, ILE29, MET174, TYR176, PHE198 and 23 more

Residues it binds most

SER 8, LEU 8, MET 8, THR 8, ALA 8, PHE 8, HIS 8, TYR 8, ARG 8, ILE 8 (residue and the binding sites it lines).

Found with

  • LBV · 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid
  • PO4 · Phosphate ion
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether

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