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Ligand · KEN

KEN · N,N-dimethylmethanamine

KEN, N,N-dimethylmethanamine (C3 H9 N, 59.1 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
KEN
Formula
C3 H9 N
Class
ligand
Structures
10
PDB entries
6

Binding sites

KEN in 10 structures; the first of them:

  • 3KEN · Human Eg5 in complex with S-trityl-L-cysteine · KEN A371 · binds LEU341
  • 4HVN · Crystal structure of hypothetical protein with ketosteroid isomerase-like protein fold… · KEN A201 · binds TRP14, TYR32, ASP34, THR54, VAL63, TYR81, MSE96, ASP112 and 1 more
  • 4NEL · Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis… · KEN A301 · binds GLN180, TRP194, TRP198, TYR211, TRP218, ASP252
  • 4OMF · The F420-reducing [NiFe]-hydrogenase complex from Methanothermobacter marburgensis, the… · KEN B403 · binds ARG110, GLN113, ILE126, LYS127, LEU128, LEU129, ASP204, THR223 and 1 more
  • 8ZXK · Cryo-EM structure of trimethylamine transporter TmaT binding with TMA · KEN A601 · binds SER102, MET105, GLY106, TRP146, TYR154, TRP326, TRP329, VAL333
  • 8ZXP · Cryo-EM structure of TmaT-TMA complexes · KEN A601 · binds GLY104, MET105, GLY106, ILE107, GLY108, TYR154, TRP325, TRP326 and 1 more
  • 3KEN · Human EG5 in complex with S-trityl-L-cysteine · KEN A371 · binds LEU341
  • 4HVN · Crystal structure of hypothetical protein with ketosteroid isomerase- like protein fold… · KEN A201 · binds TRP14, TYR32, ASP34, THR54, VAL63, TYR81, MSE96, ASP112 and 1 more
  • 4NEL · Crystal structure of a putative transcriptional regulator from saccharomonospora viridis… · KEN A301 · binds GLN180, TRP194, TRP198, TYR211, TRP218, ASP252
  • 4OMF · The F420-reducing [nife]-hydrogenase complex from methanothermobacter marburgensis, the… · KEN B403 · binds ARG110, GLN113, ILE126, LYS127, LEU128, LEU129, ASP204, THR223 and 1 more

Residues it binds most

TRP 16, TYR 12, ASP 8, THR 12, LEU 8, GLY 5, ILE 8, MSE 8, MET 5, VAL 5 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ADP · Adenosine-5'-diphosphate
  • DTZ · zinc(II)hydrogensulfide
  • FAD · Flavin-adenine dinucleotide
  • NFU · formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)
  • SF4 · Iron/sulfur cluster
  • UNK · Unknown
  • UNL · Unknown ligand
  • ZZD · S-trityl-L-cysteine
  • CL · Chloride ion

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