Ligand · KDG
KDG · 2-keto-3-deoxygluconate
KDG, 2-keto-3-deoxygluconate (C6 H10 O6, 178.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- KDG
- Formula
- C6 H10 O6
- Class
- ligand
- Structures
- 5
- PDB entries
- 3
Binding sites
KDG in 5 structures; the first of them:
- 1V1A · 2-keto-3-deoxygluconate kinase from thermus thermophilus with bound… · KDG A1302 · binds LEU11, GLY33, GLY34, ALA35, ASN38, TYR89, TYR103, ARG105 and 7 more
- 7BBR · Crystal structure of the sugar acid binding protein DctPAm from Advenella… · KDG A901 · binds TYR20, GLY21, LEU22, ASP60, PHE76, SER78, ASN133, ARG136 and 5 more
- 7ETD · Crystal structure of AbHpaI-Zn-(4S)-KDGlu complex, Class II aldolase, HpaI from… · KDG A301 · binds TRP21, ARG72, GLN149, GLU151, PHE172, GLY174, PRO175, ALA176 and 6 more
- 7BBR · Crystal structure of the sugar acid binding protein dctpam from advenella… · KDG A901 · binds GLY21, LEU22, ASP60, PHE76, SER78, ASN133, ARG136, ARG157 and 4 more
- 7ETD · Crystal structure of abhpai-zn-(4S)-kdglu complex, class II aldolase, hpai from… · KDG A301 · binds ARG72, GLN149, GLU151, GLY174, PRO175, ALA176, ASP177, LEU214 and 2 more
Residues it binds most
GLY 10, LEU 10, ARG 10, ASP 10, PHE 5, ALA 8, ASN 4, VAL 5, GLN 6, GLU 6 (residue and the binding sites it lines).
Found with
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