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Ligand · KBG

KBG · beta-D-arabino-hexopyranos-2-ulose

KBG, beta-D-arabino-hexopyranos-2-ulose (C6 H10 O6, 178.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
KBG
Formula
C6 H10 O6
Class
sugar
Structures
4
PDB entries
2

Binding sites

KBG in 4 structures; the first of them:

  • 1FQ7 · X-ray structure of inhibitor cp-72,647 bound to saccharopepsin · KBG B5 · binds GLN142
  • 2F5V · Reaction geometry and thermostability mutant of pyranose 2-oxidase from the white-rot… · KBG A1628 · binds THR169, ALA171, GLN448, HIS450, ASP452, PHE454, ARG472, PHE474 and 4 more
  • 1FQ7 · X-ray structure of inhibitor cp-72,647 bound to saccharopepsin · KBG B5 · binds GLN142
  • 2F5V · Reaction geometry and thermostability mutant of pyranose 2-oxidase from the white-rot… · KBG A1628 · binds THR169, ALA171, GLN448, HIS450, ASP452, PHE454, ARG472, PHE474 and 4 more

Residues it binds most

GLN 4, HIS 2, PHE 2, ALA 2, ARG 2, ASN 2, ASP 2, LEU 2, THR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • 2Y3 · N-(tert-butoxycarbonyl)-L-phenylalanyl-N-[(2S,3S,5R)-1-cyclohexyl-3-hydroxy-7-methyl-5-(methylcarbamoyl)octan-2-yl]-L-histidinamide
  • FAD · Flavin-adenine dinucleotide
  • BMA · beta-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • PEG · Di(hydroxyethyl)ether
  • PG4 · Tetraethylene glycol

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