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Ligand · JPX

JPX · [(2~{S})-3-[[(2~{S})-3-[(2~{S},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-3-(propanoylamino)oxan-2-yl]oxy-1-oxidanylidene-1-(pentadecylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-2-octanoyloxy-propyl] decanoate

JPX, [(2~{S})-3-[[(2~{S})-3-[(2~{S},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-3-(propanoylamino)oxan-2-yl]oxy-1-oxidanylidene-1-(pentadecylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-2-octanoyloxy-propyl] decanoate…

Component
JPX
Formula
C48 H91 N2 O15 P
Class
ligand
Structures
3
PDB entries
3

Binding sites

JPX in 3 structures; the first of them:

  • 7ZGY · S-layer Deinoxanthin Binding Complex, C3 symmetry · JPX A1203 · binds VAL495, VAL497, PHE523, VAL525, TYR546, TYR563, ARG565, GLN585 and 16 more
  • 8ACQ · S-layer Deinoxanthin-Binding Complex (SDBC), subunit DR_2577 assembled with its SOD… · JPX A1203 · binds VAL495, VAL497, PHE523, VAL525, TYR546, TYR563, ARG565, GLN585 and 16 more
  • 8AGD · Full SDBC and SOD assembly · JPX A1203 · binds VAL495, VAL497, PHE523, VAL525, TYR546, TYR563, ARG565, GLN585 and 16 more

Residues it binds most

VAL 9, TYR 9, ARG 9, PHE 9, GLN 9, GLY 9, ASP 9, ALA 9, GLU 9, ILE 9 (residue and the binding sites it lines).

Found with

  • JPI · (3~{S},5~{R},6~{R})-5-[(3~{S},7~{R},12~{S},16~{S},20~{S})-3,7,12,16,20,24-hexamethyl-24-oxidanyl-pentacosyl]-4,4,6-trimethyl-cyclohexane-1,3-diol
  • JQ6 · [(2~{S})-2-acetyloxy-3-[[(2~{S})-3-[(2~{R},3~{S},4~{S},5~{S},6~{S})-6-(hydroxymethyl)-3-(octadecanoylamino)-4,5-bis(oxidanyl)oxan-2-yl]oxy-1-oxidanylidene-1-(pentylamino)propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-propyl] ethanoate
  • CU · Copper (II) ion
  • FE · Fe (III) ion

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