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Ligand · J93

J93 · 4-[(~{Z})-1-cyano-2-[5-[2-hydroxyethyl(methyl) amino]thieno[3,2-b]thiophen-2-yl]ethenyl]benzenecarbonitrile

J93, 4-[(~{Z})-1-cyano-2-[5-[2-hydroxyethyl(methyl) amino]thieno[3,2-b]thiophen-2-yl]ethenyl]benzenecarbonitrile (C19 H15 N3 O S2, 365.5 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site…

Component
J93
Formula
C19 H15 N3 O S2
Class
ligand
Structures
3
PDB entries
2

Binding sites

J93 in 3 structures; the first of them:

  • 7EOP · Crystal structure of the Pepper aptamer in complex with HBC620 · J93 A107 · binds U8, G9, G10, C33, U40, G41, U42, C43
  • 7ZJ4 · Ligand bound state of a brocolli-pepper aptamer FRET tile · J93 E401 · binds C237, U244, G245, U246, C247, U267, G268, G269
  • 7EOP · Crystal structure of the pepper aptamer in complex with HBC620 · J93 A107 · binds U8, G9, G10, C33, U40, G41, U42, C43

Residues it binds most

G 3, U 3, C 3 (residue and the binding sites it lines).

Found with

  • GTP · Guanosine-5'-triphosphate
  • MG · Magnesium ion
  • 1TU · 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol
  • K · Potassium ion

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