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Ligand · IVC

IVC · Isovaleryl-coenzyme A

IVC, Isovaleryl-coenzyme A (C26 H44 N7 O17 P3 S, 851.6 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
IVC
Formula
C26 H44 N7 O17 P3 S
Class
ligand
Structures
5
PDB entries
3

Binding sites

IVC in 5 structures; the first of them:

  • 5K7H · Crystal structure of AibR in complex with the effector molecule isovaleryl coenzyme A · IVC A305 · binds TRP169, LYS172, TRP173, PHE174, LYS175, GLY178, ARG179, LEU180 and 15 more
  • 5W8C · The structure of a COA-dependent acyl-homoserine lactone synthase, BjaI, with MTA and… · IVC A301 · binds ILE27, PHE28, GLU31, ARG32, TRP34, TRP101, SER102, ARG103 and 14 more
  • 5K7H · Crystal structure of aibr in complex with the effector molecule isovaleryl coenzyme a · IVC A305 · binds TRP169, LYS172, TRP173, PHE174, LYS175, GLY178, ARG179, LEU180 and 14 more
  • 5K7Z · Crystal structure of aibr in complex with isovaleryl coenzyme a and operator DNA · IVC A301 · binds TRP169, LYS172, TRP173, PHE174, LYS175, GLY178, ARG179, LEU180 and 15 more
  • 5W8C · The structure of a CoA-dependent acyl-homoserine lactone synthase, bjai, with mta and… · IVC A301 · binds ILE27, PHE28, ARG32, TRP34, TRP101, SER102, ARG103, TYR104 and 9 more

Residues it binds most

LYS 8, PHE 10, LEU 8, TRP 10, ARG 10, VAL 9, ASP 10, TYR 9, GLY 8, MET 8 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • MTA · 5'-deoxy-5'-methylthioadenosine
  • NI · Nickel (II) ion
  • GOL · Glycerol

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