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Ligand · IVA

IVA · Isovaleric acid

IVA, Isovaleric acid (C5 H10 O2, 102.1 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
IVA
Formula
C5 H10 O2
Class
ligand
Structures
6
PDB entries
6

Binding sites

IVA in 6 structures; the first of them:

  • 5LW1 · Crystal structure of darpin-darpin rigid fusion, variant DD_232_11_D12 in complex JNK1A1… · IVA L1 · binds GLY201, VAL2
  • 5N7Q · Crystal structure of mature cathepsin D from the tick ixodes ricinus (IRCD1) in complex… · IVA I501 · binds SER231, LEU232, GLN256, LEU288, VAL502
  • 6APR · Structures of complexes of rhizopuspepsin with pepstatin and other statine-containing… · IVA I1 · binds LEU223, PHE278, VAL2
  • 6M9C · Pseudomonas serine-carboxyl proteinase (sedolisin) complexed with the inhibitor… · IVA B381 · binds ILE35, LEU134, GLY135, TRP136, ARG179, TYR382, TYE383
  • 6M9F · Pseudomonas serine-carboxyl proteinase (sedolisin) complexed with the inhibitor tyrostatin · IVA B381 · binds ILE35, ASN111, GLY135, TRP136, TYR382
  • 6R6A · Major aspartyl peptidase 1 from C. neoformans · IVA D400 · binds THR242, TYR273, VAL401

Residues it binds most

LEU 4, VAL 5, GLY 3, TYR 3, GLN 2, ILE 2, SER 2, TRP 2, ARG 1, ASN 1 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • CA · Calcium ion
  • PEG · Di(hydroxyethyl)ether
  • ADN · Adenosine
  • NA · Sodium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • 1PE · Pentaethylene glycol
  • ACY · Acetic acid
  • GOL · Glycerol
  • PGE · Triethylene glycol

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