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Ligand · IDY

IDY · 1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid

IDY, 1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid (C7 H12 O10 S, 288.2 g/mol), in the MolNFT structures on GenesisL1: bound in 14 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
IDY
Formula
C7 H12 O10 S
Class
sugar
Structures
14
PDB entries
7

Binding sites

IDY in 14 structures; the first of them:

  • 3UD7 · Crystal Structure Analysis of FGF1-Disaccharide(NI21) complexes · IDY D1 · binds ASN18, LYS113, LYS118, GLY126, GLN127, LYS128, ALA129
  • 3UD8 · Crystal Structure Analysis of FGF1-Disaccharide(NI22) complex · IDY D1 · binds ASN18, LYS113, LYS118, GLY126, GLN127, LYS128, ALA129
  • 3UD9 · Crystal Structure Analysis of FGF1-Disaccharide(NI23) complex · IDY D1 · binds ASN18, LYS113, LYS118, GLY126, GLN127, LYS128, ALA129
  • 3UDA · Crystal Structure Analysis of FGF1-Disaccharide(NI24) complex · IDY D1 · binds ASN18, LYS113, LYS118, GLN127, LYS128, ALA129
  • 4OEE · Crystal Structure Analysis of FGF2-Disaccharide (S3I2) complex · IDY B1 · binds ASN27, ARG120, LYS125, GLN134, LYS135, ALA136
  • 4OEF · Crystal Structure Analysis of FGF2-Disaccharide (S6I2) complex · IDY B1 · binds ASN27, ARG120, LYS125, GLN134, LYS135, ALA136
  • 4OEG · Crystal Structure Analysis of FGF2-Disaccharide (S9I2) complex · IDY B1 · binds ASN27, ARG120, LYS125, GLY133, GLN134, LYS135, ALA136
  • 3UD7 · Crystal structure analysis of FGF1-DISACCHARIDE(NI21) complexes · IDY D1 · binds ASN18, LYS113, LYS118, GLY126, GLN127, LYS128, ALA129
  • 3UD8 · Crystal structure analysis of FGF1-DISACCHARIDE(NI22) complex · IDY D1 · binds ASN18, LYS113, LYS118, GLY126, GLN127, LYS128, ALA129
  • 3UD9 · Crystal structure analysis of FGF1-DISACCHARIDE(NI23) complex · IDY D1 · binds ASN18, LYS113, LYS118, GLY126, GLN127, LYS128, ALA129
  • 3UDA · Crystal structure analysis of FGF1-DISACCHARIDE(NI24) complex · IDY D1 · binds ASN18, LYS113, LYS118, GLN127, LYS128, ALA129
  • 4OEE · Crystal structure analysis of FGF2-disaccharide (S3I2) complex · IDY B1 · binds ASN27, ARG120, LYS125, GLN134, LYS135, ALA136
  • 4OEF · Crystal structure analysis of FGF2-disaccharide (S6I2) complex · IDY B1 · binds ASN27, ARG120, LYS125, GLN134, LYS135, ALA136
  • 4OEG · Crystal structure analysis of FGF2-disaccharide (S9I2) complex · IDY B1 · binds ASN27, ARG120, LYS125, GLY133, GLN134, LYS135, ALA136

Residues it binds most

LYS 14, ALA 14, ASN 14, GLN 14, GLY 8, ARG 6 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion
  • SUS · 2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
  • GNX · 2-deoxy-3-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
  • SGN · 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
  • GNS · 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose

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