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Ligand · HSY

HSY · alpha-L-xylopyranose

HSY, alpha-L-xylopyranose (C5 H10 O5, 150.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
HSY
Formula
C5 H10 O5
Class
sugar
Structures
4
PDB entries
2

Binding sites

HSY in 4 structures; the first of them:

  • 1APW · Crystallographic analysis of transition state mimics bound to penicillopepsin… · HSY E399 · binds VAL5, THR7, VAL164
  • 1PPK · Crystallographic analysis of transition state mimics bound to penicillopepsin… · HSY E325 · binds VAL5, THR7, VAL164
  • 1APW · Crystallographic analysis of transition state mimics bound to penicillopepsin… · HSY E399 · binds VAL5, THR7, VAL164
  • 1PPK · Crystallographic analysis of transition state mimics bound to penicillopepsin… · HSY E325 · binds VAL5, THR7, VAL164

Residues it binds most

VAL 4, THR 4 (residue and the binding sites it lines).

Found with

  • MAN · alpha-D-mannopyranose
  • SO4 · Sulfate ion
  • DMF · Dimethylformamide
  • IVV · N-(3-methylbutanoyl)-L-valyl-N-{(1R)-1-[(R)-(2-ethoxy-2-oxoethyl)(hydroxy)phosphoryl]-3-methylbutyl}-L-valinamide
  • IVA · Isovaleric acid
  • NME · Methylamine

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