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Ligand · HMS

HMS · 5-O-phosphono-L-ribulose

HMS, 5-O-phosphono-L-ribulose (C5 H11 O8 P, 230.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
HMS
Formula
C5 H11 O8 P
Class
sugar
Structures
2
PDB entries
1

Binding sites

HMS in 2 structures; the first of them:

  • 1XBX · Structure of 3-keto-L-gulonate 6-phosphate decarboxylase E112D/R139V/T169A mutant with… · HMS A501 · binds ALA9, ASP11, GLU33, ASP62, LYS64, HIS136, VAL139, ALA169 and 8 more
  • 1XBX · Structure of 3-keto-L-gulonate 6-phosphate decarboxylase E112D/R139V/T169A mutant with… · HMS A501 · binds ALA9, ASP11, GLU33, ASP62, LYS64, HIS136, VAL139, ALA169 and 8 more

Residues it binds most

ALA 2, ASP 2, GLY 2, ARG 2, GLU 2, HIS 2, ILE 2, LEU 2, LYS 2, VAL 2 (residue and the binding sites it lines).

Found with

  • 5RP · Ribulose-5-phosphate
  • MG · Magnesium ion

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