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Ligand · HM8

HM8 · 2-[(1S,2R)-1-amino-2-(sulfooxy)propyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid

HM8, 2-[(1S,2R)-1-amino-2-(sulfooxy)propyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid (C7 H10 N2 O7 S2, 298.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within…

Component
HM8
Formula
C7 H10 N2 O7 S2
Class
ligand
Structures
2
PDB entries
2

Binding sites

HM8 in 2 structures; the first of them:

  • 2YGI · Methanobactin HM1 · HM8 A4 · binds ALA2, SER3, ALA5, ALA6, ALA5, ALA6
  • 2YGJ · Methanobactin MB4 · HM8 A4 · binds ALA2, SER3, ALA5, MET6

Residues it binds most

ALA 5, SER 5, MET 1 (residue and the binding sites it lines).

Found with

  • CU · Copper (II) ion
  • HM7 · 3-methylthioethane-pyrazinedione
  • HM9 · 6-(3-carbamimidamidopropyl)-3,5-dihydroxypyrazine-2-carbothioic S-acid
  • NA · Sodium ion

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