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Ligand · H1M

H1M · methyl 2-deoxy-2-(2-hydroxyethyl)-alpha-D-mannopyranoside

H1M, methyl 2-deoxy-2-(2-hydroxyethyl)-alpha-D-mannopyranoside (C9 H18 O6, 222.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
H1M
Formula
C9 H18 O6
Class
sugar
Structures
2
PDB entries
1

Binding sites

H1M in 2 structures; the first of them:

  • 3D4K · Concanavalin A Complexed to a Synthetic Analog of the Trimannoside · H1M E1 · binds TYR12, ASP16, LEU99, TYR100, ARG228
  • 3D4K · Concanavalin a complexed to a synthetic analog of the trimannoside · H1M E1 · binds TYR12, ASP16, LEU99, TYR100, ARG228

Residues it binds most

TYR 8, ARG 8, ASP 8, LEU 8 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • MN · Manganese (II) ion
  • MAN · alpha-D-mannopyranose
  • GOL · Glycerol

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