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Ligand · GYG

GYG · (1R)-4-acetamido-1,5-anhydro-3-carbamimidamido-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol

GYG, (1R)-4-acetamido-1,5-anhydro-3-carbamimidamido-2,3,4-trideoxy-1-sulfo-D-glycero-D-galacto-octitol (C11 H22 N4 O8 S, 370.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
GYG
Formula
C11 H22 N4 O8 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

GYG in 2 structures; the first of them:

  • 6BR5 · N2 neuraminidase in complex with a novel antiviral compound · GYG A512 · binds ARG118, GLU119, LEU134, ASP151, ARG152, ARG156, TRP178, SER179 and 12 more
  • 6BR5 · N2 neuraminidase in complex with a novel antiviral compound · GYG A512 · binds ARG118, GLU119, ASP151, ARG152, ARG156, TRP178, ILE222, ARG224 and 9 more

Residues it binds most

ARG 2, GLU 2, ALA 2, ASN 2, ASP 2, HIS 2, ILE 2, TRP 2, TYR 2, GLY 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • GOL · Glycerol

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