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Ligand · GYF

GYF · methyl 3-sulfanylpropanoate

GYF, methyl 3-sulfanylpropanoate (C4 H8 O2 S, 120.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
GYF
Formula
C4 H8 O2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

GYF in 2 structures; the first of them:

  • 7D79 · The structure of DcsB complex with its substrate analogue · GYF B402 · binds GLY39, PHE40, CYS42, SER114, PHE115, PHE174, MET184, ALA185 and 5 more
  • 7D79 · The structure of dcsb complex with its substrate analogue · GYF B402 · binds GLY39, PHE40, CYS42, SER114, PHE115, PHE174, ALA185, MET249 and 2 more

Residues it binds most

PHE 2, MET 2, ALA 2, CYS 2, GLY 2, HIS 2, LEU 2, SER 2 (residue and the binding sites it lines).

Found with

  • GY0 · methyl 3-[(E,3R,9R)-3,9-bis(oxidanyl)dec-4-enoyl]sulfanylpropanoate
  • NA · Sodium ion
  • CL · Chloride ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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