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Ligand · GXS

GXS · (4R)-4-hydroxy-2,5-dioxopentanoic acid

GXS, (4R)-4-hydroxy-2,5-dioxopentanoic acid (C5 H6 O5, 146.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
GXS
Formula
C5 H6 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

GXS in 2 structures; the first of them:

  • 4OE7 · Crystal structure of YagE, a KDG aldolase protein, in complex with aldol condensed… · GXS B411 · binds PRO20, PHE52, GLY55, SER56, GLY57, TYR145, PHE147, LYS174 and 6 more
  • 4OE7 · Crystal structure of yage, a kdg aldolase protein, in complex with aldol condensed… · GXS B411 · binds PRO20, PHE52, GLY55, SER56, GLY57, TYR145, PHE147, LYS174 and 6 more

Residues it binds most

GLY 4, PHE 4, TYR 4, ILE 4, LYS 4, PRO 4, SER 4, THR 4, ALA 2 (residue and the binding sites it lines).

Found with

  • GXP · (4S)-4-hydroxy-2,5-dioxopentanoic acid
  • GXT · ethanedial
  • PYR · Pyruvic acid
  • MG · Magnesium ion
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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