Ligand · GTR
GTR · beta-D-galactopyranuronic acid
GTR, beta-D-galactopyranuronic acid (C6 H10 O7, 194.1 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (9 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…
- Component
- GTR
- Formula
- C6 H10 O7
- Class
- ligand
- Structures
- 12
- PDB entries
- 9
Binding sites
GTR in 12 structures; the first of them:
- 4YZ0 · C. bescii Family 3 pectate lyase double mutant K108A/E39Q in complex with trigalacturonic… · GTR A215 · binds ASP107, LYS130, ARG133, LYS160
- 6HZE · BP0997, GH138 enzyme targeting pectin rhamnogalacturonan II · GTR A901 · binds TYR154, TRP190, TYR241, GLU294, ARG332, HIS334, LYS357, HIS391 and 6 more
- 6HZG · BP0997, GH138 enzyme targeting pectin rhamnogalacturonan II · GTR A902 · binds TYR154, TRP190, TYR241, GLU294, ARG332, HIS334, LYS357, SER361 and 4 more
- 6SZO · The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with… · GTR A501 · binds ALA267, ARG268, LYS271, GLU290, SER291, GLU305, ILE310, PHE314 and 3 more
- 5OLS · Rhamnogalacturonan lyase · GTR C1 · binds ASP280, LEU318, ARG319, TYR322, HIS325
- 6HZE · BP0997, GH138 enzyme targeting pectin rhamnogalacturonan II · GTR A901 · binds TYR154, TRP190, TYR241, GLU294, ARG332, HIS334, LYS357, HIS391 and 6 more
- 6HZG · BP0997, GH138 enzyme targeting pectin rhamnogalacturonan II · GTR A902 · binds TYR154, TRP190, TYR241, GLU294, ARG332, HIS334, LYS357, SER361 and 4 more
- 6KXA · Galectin-3 crd binds to gala dimer · GTR B1 · binds ARG144, HIS158, ASN160, ARG162, VAL172, ASN174, TRP181, GLU184
- 6KXB · Galectin-3 crd binds to gala trimer · GTR B1 · binds ARG144, HIS158, ASN160, ARG162, VAL172, ASN174, TRP181, GLU184
- 6OJL · Structure of YEPL2A R194K in complex with pentagalacturonic acid · GTR B1 · binds LYS220, HIS289
- 6SZO · The glucuronoyl esterase OTCE15A S267A variant from opitutus terrae in complex with… · GTR A501 · binds ALA267, ARG268, LYS271, SER291, GLU305, ILE310, PHE314, TRP317 and 2 more
- 7VQM · GH2 beta-galacturonate aqgala in complex with galacturonide · GTR A702 · binds ASP203, HIS337, HIS372, TYR397, ASN435, GLU436, ASN494, TYR496 and 7 more
Residues it binds most
HIS 18, GLU 16, TYR 11, TRP 14, ARG 19, ASN 12, LYS 15, ILE 8, ASP 7, SER 6 (residue and the binding sites it lines).
Found with
- ADA · alpha-D-galactopyranuronic acid
- NA · Sodium ion
- CL · Chloride ion
- EDO · 1,2-ethanediol
- CA · Calcium ion
- MG · Magnesium ion
- DMS · Dimethyl sulfoxide
- PEG · Di(hydroxyethyl)ether
- PGE · Triethylene glycol
- AQA · 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid
- RAM · alpha-L-rhamnopyranose
- X0X · beta-D-talopyranuronic acid
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