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Ligand · GPX

GPX · Guanosine 5'-diphosphate 2':3'-cyclic monophosphate

GPX, Guanosine 5'-diphosphate 2':3'-cyclic monophosphate (C10 H14 N5 O13 P3, 505.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
GPX
Formula
C10 H14 N5 O13 P3
Class
ligand
Structures
2
PDB entries
2

Binding sites

GPX in 2 structures; the first of them:

  • 1CH8 · Structure of adenylosuccinate synthetase from E. COLI complexed with a stringent… · GPX A432 · binds ASP13, GLU14, GLY15, LYS16, GLY17, LYS18, GLY40, HIS41 and 14 more
  • 1VJ7 · Crystal structure of the bifunctional catalytic fragment of RelSeq, the RelA/SpoT homolog… · GPX B1999 · binds ARG44, LYS45, SER46, ASN148, THR151, LEU152, HIS154, LEU155 and 2 more
  • 1CH8 · Structure of adenylosuccinate synthetase from E. COLI complexed with a stringent… · GPX A432 · binds ASP13, GLU14, GLY15, LYS16, GLY17, LYS18, GLY40, HIS41 and 14 more

Residues it binds most

LYS 3, GLY 2, THR 3, ASP 2, VAL 2, ARG 3, ASN 3, HIS 3, SER 3, ALA 2 (residue and the binding sites it lines).

Found with

  • HDA · Hadacidin
  • IMP · Inosinic acid
  • MG · Magnesium ion
  • NO3 · Nitrate ion
  • GDP · Guanosine-5'-diphosphate
  • MN · Manganese (II) ion

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