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Ligand · GPG

GPG · Guanylyl-2',5'-phosphoguanosine

GPG, Guanylyl-2',5'-phosphoguanosine (C20 H25 N10 O12 P, 628.5 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
GPG
Formula
C20 H25 N10 O12 P
Class
ligand
Structures
4
PDB entries
2

Binding sites

GPG in 4 structures; the first of them:

  • 2EA1 · Crystal structure of Ribonuclease I from Escherichia coli COMPLEXED WITH… · GPG A250 · binds HIS55, TRP58, MET76, TYR128, GLU129, LYS132, HIS133, LYS194 and 2 more
  • 2RNT · Three-dimensional structure of ribonuclease T1 complexed with… · GPG A105 · binds ASN36, TYR38, HIS40, LYS41, TYR42, ASN43, ASN44, TYR45 and 12 more
  • 2EA1 · Crystal structure of ribonuclease I from escherichia COLI complexed with… · GPG A250 · binds HIS55, TRP58, MET76, TYR128, GLU129, LYS132, HIS133, LYS194 and 2 more
  • 2RNT · Three-dimensional structure of ribonuclease T1 complexed with… · GPG A105 · binds ASN36, TYR38, HIS40, LYS41, TYR42, ASN43, ASN44, TYR45 and 12 more

Residues it binds most

ASN 2, HIS 4, TYR 4, GLU 4, LYS 4, GLY 2, THR 4, ALA 2, ARG 2, GLN 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion

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