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Ligand · GND

GND · 2-amino-5-guanidino-pentanoic acid

GND, 2-amino-5-guanidino-pentanoic acid (C6 H15 N4 O2 +1, 175.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
GND
Formula
C6 H15 N4 O2 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

GND in 2 structures; the first of them:

  • 1NBK · The structure of RNA aptamer for HIV Tat complexed with two argininamide molecules · GND A35 · binds C6, U7, G9, A10, U27, C28, G29
  • 1NBK · The structure of RNA aptamer for HIV tat complexed with two argininamide molecules · GND A35 · binds C6, U7, G9, A10, U27, C28, G29

Residues it binds most

U 4, G 4, A 4, C 4 (residue and the binding sites it lines).

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