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Ligand · G88

G88 · (2S)-2-(phosphonomethyl)pentanedioic acid

G88, (2S)-2-(phosphonomethyl)pentanedioic acid (C6 H11 O7 P, 226.1 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
G88
Formula
C6 H11 O7 P
Class
ligand
Structures
1
PDB entries
1

Binding sites

G88 in 1 structure; the first of them:

  • 6RTI · X-ray structure of human glutamate carboxypeptidase II (gcpii) in complex with aptamer A9G · G88 A905 · binds PHE209, ARG210, ASN257, HIS377, ASP387, GLU424, GLU425, GLY427 and 8 more

Residues it binds most

ASN 1, ASP 1, GLU 1, GLY 1, HIS 1, TYR 1, ARG 1, LEU 1, LYS 1, PHE 1 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CL · Chloride ion
  • ACT · Acetate ion
  • MPD · (4S)-2-methyl-2,4-pentanediol

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