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Ligand · FVQ

FVQ · 3-(pyridin-3-yl)prop-2-yn-1-yl alpha-D-mannopyranoside

FVQ, 3-(pyridin-3-yl)prop-2-yn-1-yl alpha-D-mannopyranoside (C14 H17 N O6, 295.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
FVQ
Formula
C14 H17 N O6
Class
sugar
Structures
4
PDB entries
2

Binding sites

FVQ in 4 structures; the first of them:

  • 4AV4 · FimH lectin domain co-crystal with a alpha-D-mannoside O-linked to a propynyl pyridine · FVQ A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 4AVK · Structure of trigonal FimH lectin domain crystal soaked with an alpha- D-mannoside… · FVQ A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, THR51, ILE52, ASP54 and 5 more
  • 4AV4 · Fimh lectin domain co-crystal with a alpha-D-mannoside O-linked to a propynyl pyridine · FVQ A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 4AVK · Structure of trigonal fimh lectin domain crystal soaked with an alpha- D-mannoside… · FVQ A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, THR51, ILE52, ASP54 and 5 more

Residues it binds most

ASP 6, ASN 6, ILE 6, PHE 6, TYR 6, GLN 6, THR 4 (residue and the binding sites it lines).

Found with

  • NI · Nickel (II) ion
  • SO4 · Sulfate ion

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