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Ligand · EJ2

EJ2 · Ni-Fe reduced active center

EJ2, Ni-Fe reduced active center (C3 H Fe N2 Ni O +1, 195.6 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
EJ2
Formula
C3 H Fe N2 Ni O +1
Class
ligand
Structures
6
PDB entries
4

Binding sites

EJ2 in 6 structures; the first of them:

  • 6FPI · Structure of fully reduced Hydrogenase (Hyd-1) variant E28Q · EJ2 L601 · binds CYS76, CYS79, VAL82, HIS83, ALA507, PRO508, ARG509, LEU512 and 5 more
  • 6FPW · Structure of fully reduced Hydrogenase (Hyd-1) · EJ2 L601 · binds CYS76, CYS79, VAL82, HIS83, ALA507, PRO508, ARG509, LEU512 and 5 more
  • 6FPI · Structure of fully reduced hydrogenase (hyd-1) variant E28Q · EJ2 L601 · binds CYS76, CYS79, VAL82, HIS83, ALA507, PRO508, ARG509, LEU512 and 5 more
  • 6FPW · Structure of fully reduced hydrogenase (hyd-1) · EJ2 L601 · binds CYS76, CYS79, VAL82, HIS83, ALA507, PRO508, ARG509, LEU512 and 5 more
  • 6G7R · Structure of fully reduced variant E28Q of E. COLI hydrogenase-1 at pH 8 · EJ2 L602 · binds CYS76, CYS79, VAL82, HIS83, ALA507, PRO508, ARG509, LEU512 and 5 more
  • 6GAL · Structure of fully reduced hydrogenase (hyd-1) variant E28Q collected at pH 10 · EJ2 L601 · binds CYS76, CYS79, VAL82, HIS83, ALA507, PRO508, ARG509, LEU512 and 5 more

Residues it binds most

CYS 12, PRO 12, VAL 12, ALA 12, ARG 12, HIS 12, LEU 12, THR 12 (residue and the binding sites it lines).

Found with

  • F3S · FE3-S4 cluster
  • SF3 · FE4-S3 cluster
  • SF4 · Iron/sulfur cluster
  • MG · Magnesium ion
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • LMT · Dodecyl-beta-D-maltoside
  • LI · Lithium ion
  • CXS · 3-cyclohexyl-1-propylsulfonic acid

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