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Ligand · EBZ

EBZ · (3S,5R,11bS)-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one

EBZ, (3S,5R,11bS)-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one (C19 H27 N O3, 317.4 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with…

Component
EBZ
Formula
C19 H27 N O3
Class
ligand
Structures
3
PDB entries
3

Binding sites

EBZ in 3 structures; the first of them:

  • 8THR · Structure of the human vesicular monoamine transporter 2 (VMAT2) bound to tetrabenazine… · EBZ A601 · binds ASN34, LEU37, THR38, VAL40, VAL41, PHE135, LYS138, ARG189 and 12 more
  • 8UCL · Komagataella pastoris Cytochrome c oxidase in complex with human VMAT2 and Tetrabenazine · EBZ A601 · binds LEU37, VAL41, PHE135, ARG189, LEU228, VAL232, GLU312, PHE334 and 7 more
  • 8WLK · Cryo-EM structure of human VMAT2 in presence of Tetrabenazine, determined in an… · EBZ A501 · binds LEU37, THR38, VAL40, PHE135, ARG189, VAL232, ILE308, GLU312 and 7 more

Residues it binds most

PHE 3, VAL 3, TYR 3, ILE 3, LEU 3, ALA 3, ARG 3, GLU 3, SER 3, GLY 2 (residue and the binding sites it lines).

Found with

  • CUA · Dinuclear copper ion
  • HEA · Heme-A
  • PTY · Phosphatidylethanolamine
  • CU · Copper (II) ion
  • ZN · Zinc ion

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