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Ligand · DYB

DYB · 4-(1,3,2-dioxaborolan-2-yloxy)butan-1-aminium

DYB, 4-(1,3,2-dioxaborolan-2-yloxy)butan-1-aminium (C6 H15 B N O3 +1, 160.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
DYB
Formula
C6 H15 B N O3 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

DYB in 2 structures; the first of them:

  • 1S84 · Porcine trypsin covalent complex with 4-amino butanol, borate and ethylene glycol · DYB A11 · binds PHE41, CYS42, HIS57, ASP189, SER190, CYS191, GLN192, GLY193 and 9 more
  • 1S84 · Porcine trypsin covalent complex with 4-amino butanol, borate and ethylene glycol · DYB A11 · binds PHE41, CYS42, HIS57, ASP189, SER190, CYS191, GLN192, GLY193 and 9 more

Residues it binds most

GLY 2, CYS 2, SER 2, ASP 2, GLN 2, HIS 2, PHE 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol

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