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Ligand · DW3

DW3 · 2-oxidanylethanal

DW3, 2-oxidanylethanal (C2 H4 O2, 60.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
DW3
Formula
C2 H4 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

DW3 in 2 structures; the first of them:

  • 6KMA · Crystal structure of SucA with glycolaldehyde-1-13C from Vibrio vulnificus · DW3 A1005 · binds TYR300, HIS301, SER324
  • 6KMA · Crystal structure of suca with glycolaldehyde-1-13C from vibrio vulnificus · DW3 A1005 · binds TYR300, HIS301, SER324

Residues it binds most

HIS 16, PHE 10, SER 10, TYR 8, GLN 6, PRO 2 (residue and the binding sites it lines).

Found with

  • TPP · Thiamine diphosphate
  • CA · Calcium ion
  • MG · Magnesium ion
  • P6G · Hexaethylene glycol

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