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Ligand · DR9

DR9 · 1-cis-9-octadecanoyl-2-cis-9-hexadecanoyl phosphatidyl glycerol

DR9, 1-cis-9-octadecanoyl-2-cis-9-hexadecanoyl phosphatidyl glycerol (C40 H75 O10 P, 747.0 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues…

Component
DR9
Formula
C40 H75 O10 P
Class
ligand
Structures
6
PDB entries
5

Binding sites

DR9 in 6 structures; the first of them:

  • 7KC4 · Human WLS in complex with WNT8A · DR9 B801 · binds LYS181, CYS182, ILE185, SER186, GLY187, SER188, GLY305, TYR308 and 18 more
  • 7Z0S · Structure of the Escherichia coli formate hydrogenlyase complex (anaerobic preparation… · DR9 E603 · binds SER365, THR366, PRO367, ASN368, PHE2, ALA183, PHE184, PHE187 and 14 more
  • 8UIU · Structure of an FMO from Bacillus niacini · DR9 A502 · binds VAL83, MSE91, TYR220, PHE222, PHE224, TRP318, GLY319, LEU368 and 24 more
  • 8URC · Bacillus niacini flavin monooxygenase · DR9 A502 · binds VAL81, VAL83, MSE91, TYR220, PHE222, PHE224, TRP318, GLY319 and 26 more
  • 8URD · Bacillus niacini flavin monooxygenase with bound (2,6)DHP · DR9 C501 · binds VAL81, VAL83, MET91, PHE222, PHE224, TRP318, LEU368, THR371 and 21 more
  • 7KC4 · Human wls in complex with WNT8A · DR9 B801 · binds LYS181, CYS182, ILE185, SER186, GLY187, SER188, GLY305, TYR308 and 14 more

Residues it binds most

PHE 16, ILE 16, LEU 16, LYS 14, ALA 15, THR 14, TYR 15, MSE 6, MET 10, VAL 11 (residue and the binding sites it lines).

Found with

  • FAD · Flavin-adenine dinucleotide
  • PLM · Palmitic acid
  • Y01 · Cholesterol hemisuccinate
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CDL · Cardiolipin
  • FCO · Carbonmonoxide-(dicyano) iron
  • LMN · Lauryl Maltose Neopentyl Glycol
  • PTY · Phosphatidylethanolamine
  • SF4 · Iron/sulfur cluster
  • WTQ · pyridine-2,6-diol

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