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Ligand · DPX

DPX · Mono-{4-[(4-amino-2-methyl-pyrimidin-5-ylmethyl)-amino]-2-hydroxy-3-mercapto-pent-3-enyl-phosphono} ester

DPX, Mono-{4-[(4-amino-2-methyl-pyrimidin-5-ylmethyl)-amino]-2-hydroxy-3-mercapto-pent-3-enyl-phosphono} ester (C11 H20 N4 O8 P2 S, 430.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
DPX
Formula
C11 H20 N4 O8 P2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

DPX in 2 structures; the first of them:

  • 1ZPD · Pyruvate decarboxylase from zymomonas mobilis · DPX A600 · binds THR388, GLY389, ASP390, SER391, GLY413, HIS414, ILE415, GLY439 and 17 more
  • 1ZPD · Pyruvate decarboxylase from zymomonas mobilis · DPX A600 · binds THR388, GLY389, ASP390, SER391, GLY413, HIS414, ILE415, GLY439 and 17 more

Residues it binds most

GLY 8, THR 8, ASP 8, GLU 8, HIS 8, ILE 8, VAL 8, SER 8, ALA 8, ASN 8 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CIT · Citric acid

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