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Ligand · DE2

DE2 · 1-deoxy-L-erythrulose

DE2, 1-deoxy-L-erythrulose (C4 H8 O3, 104.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
DE2
Formula
C4 H8 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

DE2 in 2 structures; the first of them:

  • 4RCV · M. tuberculosis 1-deoxy-d-xylulose-5-phosphate reductoisomerase bound to… · DE2 A403 · binds LYS128, ASP151, SER152, GLU153, ASN209, SER213, ASN218, LYS219 and 2 more
  • 4RCV · M. tuberculosis 1-deoxy-D-xylulose-5-phosphate reductoisomerase bound to… · DE2 A403 · binds LYS128, ASP151, SER152, GLU153, ASN209, SER213, ASN218, LYS219 and 2 more

Residues it binds most

ASN 2, GLU 2, LYS 2, SER 2, ASP 2, MET 2 (residue and the binding sites it lines).

Found with

  • NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate
  • MN · Manganese (II) ion
  • PO3 · Phosphite ion

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