Ligand · DDQ
DDQ · Decylamine-N,N-dimethyl-N-oxide
DDQ, Decylamine-N,N-dimethyl-N-oxide (C12 H27 N O, 201.3 g/mol), in the MolNFT structures on GenesisL1: bound in 26 records (20 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…
- Component
- DDQ
- Formula
- C12 H27 N O
- Class
- ligand
- Structures
- 26
- PDB entries
- 20
Binding sites
DDQ in 26 structures; the first of them:
- 5UXI · Protein 4 with aldehyde deformylating oxygenase activity from Nostoc puntiforme · DDQ A300 · binds VAL29, GLY32, GLU33, ALA36, TYR40, GLU61, GLN111, GLU116 and 3 more
- 6GK0 · Human dihydroorotate dehydrogenase in complex with class III histone deacetylase inhibitor · DDQ A512 · binds GLU53, ARG57, HIS101, PRO125, GLN126, ASN150, SER151, HIS152
- 6VND · Quaternary Complex of human dihydroorotate dehydrogenase (DHODH) with flavin… · DDQ A404 · binds TYR37, LEU41, LEU45, LEU57, ALA58, PHE61, LEU66, LEU67 and 1 more
- 6ZOB · 3-Formylrifamycin SV binding to the access pocket of AcrB L protomer · DDQ B1103 · binds ARG8, PHE11, GLY440, VAL443, GLY444, CYS887, ALA890, LEU891
- 6ZOC · Erythromycin binding to the access pocket of AcrB-G616P L protomer and 3-formylrifamycin… · DDQ B1108 · binds PHE4, ARG8, PHE11, VAL14, ILE18, MET447, CYS887, LEU891
- 6ZOG · Minocycline binding to the deep binding pocket of AcrB-I38F_I671T · DDQ C1311 · binds ARG468, SER471
- 5UXI · Protein 4 with aldehyde deformylating oxygenase activity from nostoc puntiforme · DDQ A300 · binds VAL29, GLY32, GLU33, ALA36, TYR40, GLU61, GLN111, GLU116 and 3 more
- 6ET4 · Human dihydroorotate dehydrogenase in complex with novel inhibitor · DDQ A504 · binds TYR38, LEU42, PHE62, LEU67, LEU68
- 6GK0 · Human dihydroorotate dehydrogenase in complex with class III histone deacetylase inhibitor · DDQ A512 · binds GLU53, ARG57, HIS101, PRO125, GLN126, ASN150, SER151, HIS152
- 6O9V · KIRBAC3.1 mutant at a resolution of 3.1 ångströms · DDQ A405 · binds ARG202, SER205, ILE207, PHE208, SER209, LEU210, SER211, TRP212
- 6Q4N · Fusidic acid bound ACRB_V340A · DDQ B1113 · binds MET1, PHE4, PHE5, ILE15
- 6Q4O · Fusidic acid bound ACRB_I27A · DDQ A1107 · binds TRP515, ARG518
- 6Q4P · Fusidic acid bound ACRB_N298A · DDQ A1106 · binds PRO9, TRP13, ILE17, TRP895
- 6VND · Quaternary complex of human dihydroorotate dehydrogenase (dhodh) with flavin… · DDQ A404 · binds TYR37, LEU41, LEU45, PHE61, LEU66, LEU67, PRO68
- 6ZO6 · Minocycline binding to the deep binding pocket of acrb-G619P · DDQ A1105 · binds PHE386, PHE388, ARG468, ILE472
Residues it binds most
PHE 41, ALA 22, ARG 26, LEU 16, ILE 20, SER 14, GLU 8, GLY 12, VAL 14, TRP 11 (residue and the binding sites it lines).
Found with
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.