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Ligand · DCF

DCF · 2'-deoxycoformycin

DCF, 2'-deoxycoformycin (C11 H16 N4 O4, 268.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
DCF
Formula
C11 H16 N4 O4
Class
ligand
Structures
4
PDB entries
2

Binding sites

DCF in 4 structures; the first of them:

  • 6N91 · Crystal Structure of Adenosine Deaminase from Vibrio cholerae Complexed with Pentostatin… · DCF A401 · binds HIS12, HIS14, ASP16, LEU56, LEU60, LEU63, TYR103, ILE139 and 8 more
  • 6N9M · Crystal Structure of Adenosine Deaminase from Salmonella typhimurium with Pentostatin… · DCF A401 · binds HIS12, HIS14, ASP16, LEU56, LEU60, LEU63, SER100, ILE139 and 8 more
  • 6N91 · Crystal structure of adenosine deaminase from vibrio cholerae complexed with pentostatin… · DCF A401 · binds HIS12, HIS14, ASP16, LEU56, LEU60, LEU63, TYR103, ILE139 and 8 more
  • 6N9M · Crystal structure of adenosine deaminase from salmonella typhimurium with pentostatin… · DCF A401 · binds HIS12, HIS14, ASP16, LEU56, LEU60, LEU63, SER100, ILE139 and 8 more

Residues it binds most

HIS 6, ASP 6, LEU 6, SER 6, ALA 6, GLU 6, GLY 6, ILE 6, TYR 4 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • FMT · Formic acid
  • CA · Calcium ion
  • NA · Sodium ion
  • PO4 · Phosphate ion
  • SO4 · Sulfate ion
  • CXS · 3-cyclohexyl-1-propylsulfonic acid
  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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