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Ligand · DBB

DBB · D-alpha-aminobutyric acid

DBB, D-alpha-aminobutyric acid (C4 H9 N O2, 103.1 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
DBB
Formula
C4 H9 N O2
Class
ligand
Structures
3
PDB entries
3

Binding sites

DBB in 3 structures; the first of them:

  • 6VB8 · Crystal structure of a lectin from Canavalia brasiliensis seed (ConBr) complexed with… · DBB A306 · binds TRP88, SER113, LYS114, LEU115, ASN124, ALA125, LEU126, PRO178 and 2 more
  • 7UN2 · Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with… · DBB B303 · binds VAL129, PHE130, GLN137, ASP139, TRP88, SER113, LYS114, LEU115 and 6 more
  • 7UOD · Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with… · DBB A301 · binds TRP88, SER113, LYS114, LEU115, ASN124, ALA125, LEU126, PRO178 and 6 more

Residues it binds most

LEU 4, VAL 4, ALA 4, ASN 4, HIS 4, LYS 4, PRO 4, SER 4, TRP 4, ASP 3 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • MN · Manganese (II) ion
  • CL · Chloride ion
  • GOL · Glycerol
  • 3IB · 3-indolebutyric acid
  • CFA · (2,4-dichlorophenoxy)acetic acid
  • IAC · 1H-indol-3-ylacetic acid
  • PEG · Di(hydroxyethyl)ether

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