Ligand · DAR
DAR · D-arginine
DAR, D-arginine (C6 H15 N4 O2 +1, 175.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- DAR
- Formula
- C6 H15 N4 O2 +1
- Class
- ligand
- Structures
- 8
- PDB entries
- 8
Binding sites
DAR in 8 structures; the first of them:
- 1BG0 · Transition state structure of arginine kinase · DAR A403 · binds SER63, GLY64, VAL65, GLY66, TYR68, PHE194, GLU225, CYS271 and 4 more
- 1P52 · Structure of Arginine kinase E314D mutant · DAR A403 · binds SER63, GLY64, VAL65, GLY66, TYR68, PHE194, GLU225, CYS271 and 5 more
- 6MP8 · X-ray crystal structure of VioC bound to Fe(II), D-arginine, and 2-oxoglutarate · DAR A403 · binds GLN137, LEU156, VAL157, SER158, LEU165, GLY166, TRP167, HIS168 and 5 more
- 6P2I · Acyclic imino acid reductase (Bsp5) in complex with NADPH and D-Arg · DAR A402 · binds THR10, GLU51, ILE72, THR73, THR74, SER75, TYR97, ARG229 and 3 more
- 6SCK · Thermolysin in complex with fragment J77 · DAR E413 · binds TYR193, SER201, LEU202, ARG203, TYR211, ASP213, HIS231, ILE232
- 7AC9 · Thrombin in complex with D-arginine (j77) · DAR H306 · binds ASP189, ALA190, CYS191, GLU192, GLY193, ASP194, SER195, VAL213 and 6 more
- 7YW9 · Crystal structure of the triple mutant CmnC-L136Q,S138G,D249Y in complex with alpha-KG · DAR A405 · binds GLN117, GLN136, VAL137, GLY138, LEU145, GLY146, TRP147, HIS148 and 8 more
- 8BSA · Vc1313-LBD bound to D-arginine · DAR A301 · binds ASN43, ASP47, THR48, ALA51, TYR102, THR105, VAL106, TRP107 and 4 more
Residues it binds most
THR 6, GLY 5, TYR 8, ASP 7, GLU 9, SER 8, ASN 6, TRP 7, VAL 7, ARG 6 (residue and the binding sites it lines).
Found with
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