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Ligand · D5A

D5A · trans-mi2-acetato-(O, O')-N-imidazyl-pentaaqua-dirhodium(II, II)

D5A, trans-mi2-acetato-(O, O')-N-imidazyl-pentaaqua-dirhodium(II, II) (C5 H11 N2 O7 Rh2, 417.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues…

Component
D5A
Formula
C5 H11 N2 O7 Rh2
Class
ligand
Structures
2
PDB entries
1

Binding sites

D5A in 2 structures; the first of them:

  • 7QHR · Unexpected imidazole coordination to dirhodium tetraacetate complex in a protein… · D5A B202 · binds TYR76, THR78, HIS105, VAL124
  • 7QHR · Unexpected imidazole coordination to dirhodium tetraacetate complex in a protein… · D5A B202 · binds TYR76, THR78, HIS105, VAL124

Residues it binds most

HIS 2, THR 2, TYR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • CJI · cis-mi2-acetato-(O, O')-N-imidazyl-pentaaqua-dirhodium(II, II)
  • D1O · tri-(mi2-acetato-(O, O')-diaqua-dirhodium(II, II)
  • D3I · octaaqua-dirhodium (II, II) fragment

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