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Ligand · CY9

CY9 · (3S,3aR,4S,6S,6aR,7E,10S,12R,13E,15R,15aR)-3-benzyl-6,12-dihydroxy-4,10,12-trimethyl-5-methylidene-1,11-dioxo-2,3,3a,4,5,6,6a,9,10,11,12,15-dodecahydro-1H-cycloundeca[d]isoindol-15-yl acetate

CY9, (3S,3aR,4S,6S,6aR,7E,10S,12R,13E,15R,15aR)-3-benzyl-6,12-dihydroxy-4,10,12-trimethyl-5-methylidene-1,11-dioxo-2,3,3a,4,5,6,6a,9,10,11,12,15-dodecahydro-1H-cycloundeca[d]isoindol-15-yl acetate (C30 H37 N O6, 507.6 g/mol), in the MolNFT…

Component
CY9
Formula
C30 H37 N O6
Class
ligand
Structures
4
PDB entries
2

Binding sites

CY9 in 4 structures; the first of them:

  • 3EKS · Crystal Structure of Monomeric Actin bound to Cytochalasin D · CY9 A903 · binds TYR133, ALA135, ILE136, VAL139, LEU140, TYR143, GLY168, TYR169 and 10 more
  • 3EKU · Crystal Structure of Monomeric Actin bound to Cytochalasin D · CY9 A903 · binds TYR133, VAL134, ALA135, ILE136, VAL139, LEU140, TYR143, GLY168 and 10 more
  • 3EKS · Crystal structure of monomeric actin bound to cytochalasin D · CY9 A903 · binds TYR133, ALA135, ILE136, VAL139, LEU140, TYR143, GLY168, TYR169 and 10 more
  • 3EKU · Crystal structure of monomeric actin bound to cytochalasin D · CY9 A903 · binds TYR133, VAL134, ALA135, ILE136, VAL139, LEU140, TYR143, GLY168 and 10 more

Residues it binds most

TYR 4, LEU 4, ALA 4, PHE 4, VAL 4, CYS 4, GLY 4, ILE 4, LYS 4, MET 4 (residue and the binding sites it lines).

Found with

  • ATP · Adenosine-5'-triphosphate
  • CA · Calcium ion

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