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Ligand · CWE

CWE · R-naringenin

CWE, R-naringenin (C15 H12 O5, 272.3 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
CWE
Formula
C15 H12 O5
Class
ligand
Structures
6
PDB entries
4

Binding sites

CWE in 6 structures; the first of them:

  • 6F71 · Crystal structure of glutathione transferase Omega 6S from Trametes versicolor in complex… · CWE A300 · binds LEU84, GLU88, ARG111, THR114, THR115, GLU118, THR119, ILE163 and 3 more
  • 6G8H · Flavonoid-responsive Regulator FrrA in complex with (R,S)-Naringenin · CWE DDD301 · binds PHE108, ARG176, GLY177, GLU178, PRO180, LEU181, PHE108, ASP113 and 7 more
  • 6SRA · Crystal structure of glutathione transferase Omega 2C from Trametes versicolor in complex… · CWE A302 · binds LEU82, GLU86, ARG109, ILE112, ASP113, SER116, THR117, ILE159
  • 6F71 · Crystal structure of glutathione transferase omega 6S from trametes versicolor in complex… · CWE A300 · binds GLU88, ARG111, THR114, THR115, GLU118, THR119, LEU84, VAL85 and 1 more
  • 6SRA · Crystal structure of glutathione transferase omega 2C from trametes versicolor in complex… · CWE A302 · binds LEU82, GLU86, ARG109, ILE112, ASP113, SER116, THR117, ILE159
  • 7DQM · E. COLI gyrb ATPase domain in complex with naringenin · CWE B301 · binds VAL43, ASN46, GLU50, ASP73, ILE78, PRO79, ILE94, VAL120 and 2 more

Residues it binds most

GLU 14, THR 13, LEU 13, ARG 13, ILE 9, VAL 10, ASP 6, SER 4, PRO 2, GLY 1 (residue and the binding sites it lines).

Found with

  • GSH · Glutathione
  • AX7 · 1H-benzimidazol-2-amine
  • NAR · Naringenin
  • PO4 · Phosphate ion
  • NHE · 2-[N-cyclohexylamino]ethane sulfonic acid

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