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Ligand · CPA

CPA · 2'-deoxycytidine-2'-deoxyadenosine-3',5'-monophosphate

CPA, 2'-deoxycytidine-2'-deoxyadenosine-3',5'-monophosphate (C19 H25 N8 O9 P, 540.4 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
CPA
Formula
C19 H25 N8 O9 P
Class
ligand
Structures
6
PDB entries
3

Binding sites

CPA in 6 structures; the first of them:

  • 1R5C · X-ray structure of the complex of Bovine seminal ribonuclease swapping dimer with d(CpA) · CPA A125 · binds LYS41, VAL43, ASN44, THR45, CYS65, ASN67, GLN69, ASN71 and 10 more
  • 1RPG · Structures of RNase a complexed with 3'-cmp and D(CPA): active site conformation and… · CPA A126 · binds LYS7, GLN11, HIS12, VAL43, ASN44, THR45, CYS65, GLN69 and 11 more
  • 1TQ9 · Non-covalent swapped dimer of Bovine Seminal Ribonuclease in complex with… · CPA A126 · binds LYS41, VAL43, ASN44, THR45, CYS65, GLN69, ASN71, ASP83 and 9 more
  • 1R5C · X-ray structure of the complex of bovine seminal ribonuclease swapping dimer with D(CPA) · CPA A125 · binds LYS41, VAL43, ASN44, THR45, CYS65, ASN67, GLN69, ASN71 and 10 more
  • 1RPG · Structures of RNase a complexed with 3'-cmp and D(CPA): active site conformation and… · CPA A126 · binds LYS7, GLN11, HIS12, VAL43, ASN44, THR45, CYS65, GLN69 and 11 more
  • 1TQ9 · Non-covalent swapped dimer of bovine seminal ribonuclease in complex with… · CPA A126 · binds LYS41, VAL43, ASN44, THR45, CYS65, GLN69, ASN71, ASP83 and 9 more

Residues it binds most

ASN 10, GLN 10, HIS 10, LYS 10, VAL 10, ASP 10, ALA 10, CYS 10, PHE 10, THR 10 (residue and the binding sites it lines).

Found with

  • MPD · (4S)-2-methyl-2,4-pentanediol

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