Ligand · CDI
CDI · 2C-methyl-D-erythritol 2,4-cyclodiphosphate
CDI, 2C-methyl-D-erythritol 2,4-cyclodiphosphate (C5 H12 O9 P2, 278.1 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…
- Component
- CDI
- Formula
- C5 H12 O9 P2
- Class
- ligand
- Structures
- 8
- PDB entries
- 5
Binding sites
CDI in 8 structures; the first of them:
- 1H48 · The structure of 2C-Methyl-D-erythritol 2,4-cyclodiphosphate synthase in complex with CMP… · CDI A201 · binds ASP8, VAL9, HIS10, ALA33, HIS34, SER35, GLY37, HIS42 and 8 more
- 1JY8 · 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (IspF) · CDI A421 · binds ASP8, HIS10, ALA33, HIS34, SER35, GLY37, HIS42, ILE57 and 6 more
- 1KNJ · Co-Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate Synthase (ispF) from… · CDI A301
- 4G9P · Structure of the GcpE-MEcPP (IspG) complex from Thermus thermophilus · CDI A502 · binds MET29, ARG56, ASP87, HIS89, ARG110, ASN112, ARG141, ASN145 and 5 more
- 4S38 · IspG in complex MEcPP · CDI A900 · binds PRO298, VAL345, ASN346
- 1H48 · The structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase in complex with cmp… · CDI A201 · binds ASP8, VAL9, HIS10, ALA33, HIS34, SER35, GLY37, HIS42 and 8 more
- 1JY8 · 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (ispf) · CDI A421 · binds ASP8, HIS10, ALA33, HIS34, SER35, GLY37, HIS42, ILE57 and 6 more
- 1KNJ · Co-crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (ispf) from… · CDI A301
Residues it binds most
HIS 15, ASP 15, PHE 14, GLY 14, PRO 15, SER 15, ALA 14, ILE 14, LEU 14, GLU 13 (residue and the binding sites it lines).
Found with
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