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Ligand · CA0

CA0 · 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine

CA0, 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine (C11 H15 N6 O8 P, 390.2 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
CA0
Formula
C11 H15 N6 O8 P
Class
ligand
Structures
5
PDB entries
5

Binding sites

CA0 in 5 structures; the first of them:

  • 7VYJ · The structure of GdmN in complex with carbamoyl adenylate intermediate · CA0 A702 · binds HIS27, HIS133, HIS137, ASP156, GLY157, ARG158, GLY187, GLY188 and 9 more
  • 7VZN · The structure of GdmN in complex with carbamoyl adenylate intermediate and… · CA0 A703 · binds HIS27, PHE83, HIS133, HIS137, ASP156, GLY157, ARG158, GLY187 and 15 more
  • 7VZQ · The structure of GdmN V24Y/G157A/R158A/G188R mutant in complex with carbamoyl adenylate… · CA0 A707 · binds HIS27, HIS133, HIS137, ASP156, ALA157, ALA158, GLY187, ARG188 and 13 more
  • 7VZZ · The structure of GdmN in complex with the natural tetrahedral intermediate, carbamoyl… · CA0 B708 · binds HIS27, ASP28, HIS133, HIS137, ASP156, GLY157, ARG158, GLY187 and 14 more
  • 7XB6 · Crystal structure of the O-carbamoyltransferase VtdB in complex with carbamoyl adenylate… · CA0 A602 · binds HIS35, TRP91, HIS157, HIS161, ASP180, GLY181, GLN182, ALA213 and 14 more

Residues it binds most

HIS 11, GLY 11, ASP 11, ASN 11, LEU 11, TYR 8, ALA 6, GLU 11, MET 9, PHE 7 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • CP · Phosphoric acid mono(formamide)ester
  • 83Z · (5~{S},6~{E},8~{S},9~{S},12~{R},15~{E})-21-chloranyl-12,20-dimethoxy-6,8,16-trimethyl-5,9-bis(oxidanyl)-2-azabicyclo[16.3.1]docosa-1(21),6,15,18(22),19-pentaene-3,11-dione
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether
  • 8CW · [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl [(~{S})-azanyl-[[(5~{S},6~{E},8~{S},9~{S},12~{R},13~{E},15~{E})-21-chloranyl-12,20-dimethoxy-6,8,16-trimethyl-5-oxidanyl-3,11-bis(oxidanylidene)-2-azabicyclo[16.3.1]docosa-1(21),6,13,15,18(22),19-hexaen-9-yl]oxy]-oxidanyl-methyl] hydrogen phosphate
  • MG · Magnesium ion
  • CL · Chloride ion

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