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Ligand · 83Z

83Z · (5~{S},6~{E},8~{S},9~{S},12~{R},15~{E})-21-chloranyl-12,20-dimethoxy-6,8,16-trimethyl-5,9-bis(oxidanyl)-2-azabicyclo[16.3.1]docosa-1(21),6,15,18(22),19-pentaene-3,11-dione

83Z, (5~{S},6~{E},8~{S},9~{S},12~{R},15~{E})-21-chloranyl-12,20-dimethoxy-6,8,16-trimethyl-5,9-bis(oxidanyl)-2-azabicyclo[16.3.1]docosa-1(21),6,15,18(22),19-pentaene-3,11-dione (C26 H34 Cl N O6, 492.0 g/mol), in the MolNFT structures on…

Component
83Z
Formula
C26 H34 Cl N O6
Class
ligand
Structures
3
PDB entries
3

Binding sites

83Z in 3 structures; the first of them:

  • 7VZN · The structure of GdmN in complex with carbamoyl adenylate intermediate and… · 83Z A702 · binds VAL24, PHE25, PHE26, HIS27, TYR82, PHE83, HIS87, VAL91 and 9 more
  • 7VZY · The structure of GdmN complex with AMP and 20-O-methyl-19-chloroproansamitocin · 83Z A701 · binds VAL24, PHE25, PHE26, HIS27, TYR82, PHE83, HIS87, VAL91 and 9 more
  • 7VZZ · The structure of GdmN in complex with the natural tetrahedral intermediate, carbamoyl… · 83Z B709 · binds MET242, VAL243, PRO244, VAL24, PHE25, PHE26, HIS27, TYR82 and 9 more

Residues it binds most

PHE 5, HIS 5, VAL 5, ARG 5, ASP 5, GLY 5, LEU 5, MET 5, PRO 5, TYR 5 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • CA0 · 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine
  • CP · Phosphoric acid mono(formamide)ester
  • GOL · Glycerol
  • PEG · Di(hydroxyethyl)ether
  • 8CW · [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl [(~{S})-azanyl-[[(5~{S},6~{E},8~{S},9~{S},12~{R},13~{E},15~{E})-21-chloranyl-12,20-dimethoxy-6,8,16-trimethyl-5-oxidanyl-3,11-bis(oxidanylidene)-2-azabicyclo[16.3.1]docosa-1(21),6,13,15,18(22),19-hexaen-9-yl]oxy]-oxidanyl-methyl] hydrogen phosphate
  • AMP · Adenosine monophosphate

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