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Ligand · C5B

C5B · (1S,3R)-1-aminocyclopentane-1,3-dicarboxylic acid

C5B, (1S,3R)-1-aminocyclopentane-1,3-dicarboxylic acid (C7 H11 N O4, 173.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
C5B
Formula
C7 H11 N O4
Class
ligand
Structures
3
PDB entries
2

Binding sites

C5B in 3 structures; the first of them:

  • 2E4X · Crystal structure of the extracellular region of the group II metabotropic glutamate… · C5B A1001 · binds ARG64, ARG68, SER149, TYR150, SER151, ALA172, SER173, THR174 and 5 more
  • 7T3N · R184Q/E191Q mutant of rat vesicular glutamate transporter 2 (VGLUT2) · C5B A601 · binds PHE85, ARG88, TYR135, TYR195, SER222, TYR223, ASN319, ARG322 and 5 more
  • 2E4X · Crystal structure of the extracellular region of the group II metabotropic glutamate… · C5B A1001 · binds ARG64, ARG68, SER149, TYR150, SER151, ALA172, SER173, THR174 and 5 more

Residues it binds most

SER 5, TYR 5, ARG 5, ALA 4, ASP 4, GLY 4, LYS 4, THR 4, ASN 1, PHE 1 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • I7Y · (2R)-2-(methoxymethyl)-4-{[(25R)-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside

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